European Molecular
Biology Computing Network - Biocomputing Tutorials cri-map" Bibliography
and Links

CRI-MAP Tutorial - Bibliography & Links


CRI-MAP tutorial contents:

Manuals Manual Table of Contents Data Sets Data Formatting Mapping & LOD scores Testing & X-overs
 
Manuals:
Web & text
versions
Web Manual
Table of
Contents
 Tutorial 
 Practice 
 Datasets 
Formating
data with
"prepare"
Mapping
with
"build"
Testing &
Extending
Maps


There are many resources on the Internet for those of us performing genetic mapping and linkage analysis. Follow the links below to find even more!


Linkage Centres & "Home Pages"

The CEPH/Genethon Center
Cooperative Human Linkage Center
GDB, the genome database for humans

Linkage Newsgroup
bionet.molbio.gene-linkage

Linkage Programmes
BIOBOX at the Finnish EMBnet Node have a collection of linkage programs
EBI Linkage and Mapping Software Repository
NIH repository
LNKTOCRI, for converting pedigree data formatted for Linkage to the CRI-MAP format. By Jillian Blaschak, with modifications by Tara Matise. Available upon request only.
The Robert S. Boas Centre has an extensive list of Genetic Analysis Software

Genetics-related Pages & etc.
Yahoo's Genetics Info


BIBLIOGRAPHY (incl. references from CRI-MAP Documentation)

Barker D, Green P, Knowlton R, Schumm J, Lander E, Oliphant A, Willard H, Akots G, Brown V, Gravius T, Helms C, Nelson C, Parker C, Rediker K, Watt D, Weiffenbach B, Donis-Keller H (1987): "Genetic linkage map of human chromosome 7 with 63 DNA markers." Proc. Natl. Acad. Sci. USA 84: 8006-8010.
Bishop, M. J. (1994): "Guide to Human Genome Computing." Academic Press.
Cottingham, R. W. Jr., Idury, R. M., and Schaffer, A. A. (1993): "Faster Sequential Linkage Computations." American Journal of Human Genetics. 53:252-263.
Davies, K. E. (1986): "Human Genetic Diseases - A Practical Approach." IRL Press, Oxford England and Washington, D.C.
Donis-Keller H, Green P, Helms C, Cartinhour S, Weiffenbach B, Stephens K, Keith T, Bowden D, Smith D, Lander E, Botstein D, Akots G, Rediker K, Gravius T, Brown V, Rising M, Parker C, Powers J, Watt D, Kauffman E, Bricker A, Phipps P, Muller-Kahle H, Fulton T, Ng S, Schumm J, Braman J, Knowlton R, Barker D, Crooks S, Lincoln S, Daly M, Abrahamson J (1987): "A genetic linkage map of the human genome." Cell 51: 319-337.
Dracopoli, N. C., Haines, J. L., Korf, B. R., Moir, D.T., Morton, C. C., Seidman, C. E., Seidman, J. G., Smith, D. R. (1994): "Current Protocols in Human Genetics." John Wiley and Sons, Inc., USA.
Goldgar D, Green P, Parry D, Mulvihill J (1989): "Multipoint linkage analysis in Neurofibromatosis Type I: An international collaboration." Am J Human Genetics 44: 6-12.
Green, P. (1988): "Rapid construction of multilocus genetic linkage maps. I. Maximum likelihood estimation." (draft manuscript).
Kernighan, B., Ritchie, D. (1978): "The C programming language." Prentice-Hall.
Khoury, M. J., Beaty, T. H., and Cohen, B. H. (1993): "Fundamentals of Genetic Epidemiology." Oxford University Press.
Lander E, Green P (1987): "Construction of multilocus genetic linkage maps in humans." Proc. Natl. Acad. Sci. USA 84: 2363-2367.
Lathrop, G.M., Lalouel, J.M., Julier, C. , and Ott, J. (1984): "Strategies for Multilocus Analysis in Humans." PNAS. 81:3443-3446.
Lathrop, G.M. and Lalouel, J.M. (1984): "Easy Calculations of LOD Scores and Genetic Risks on Small Computers." American Journal of Human Genetics. 36:460-465.
Lathrop, G.M., Lalouel, J.M., and R. L. White. (1986): "Construction of Human Linkage Maps: Likelihood Calculations for Multilocus Analysis." Genetic Epidemiology. 3:39-52.
Ott, J. (1991): "Analysis of Human Genetic Linkage." Johns Hopkins University Press.
Schaffer, A. A. , Gupta, S. K., Shriram, K., and Cottingham, R. W. Jr. (1994): "Avoiding Recomputation in Linkage Analysis". Human Heredity. 44:225-37.
Spurr, N. et al (1992): "The CEPH Consortium Linkage Map of Human Chromosome 2." Genomics 14:1055-1063.
Terwilliger, J. D. and Ott, J. (1994): "Handbook of Human Genetic Linkage," Johns Hopkins University Press.
Thompson, E. A. (1986): "Pedigree Analysis in Human Genetics." Johns Hopkins University Press, Baltimore and London.


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Updated on Wednesday, 22 January, 2005
Copyright 1995-1996 by David W. Featherston. Updated for the MacOSX by Erik Bongcam-Rudloff